Trias is an encoder-decoder language model trained to reverse-translate protein sequences into codon sequences. It learns codon usage patterns from 10 million mRNA coding sequences across 640 ...

We analyzed transcriptomic-weighted data from four mouse strains across three different germ layer tissues (liver, heart, and eye) and through embryonic stages. Applying a multifaceted approach, we ...

Predicting phenotypic properties of a virus directly from its sequence data is an attractive goal for viral epidemiology. Here, we focus narrowly on the Orthocoronavirinae clade and demonstrate models ...

The first rain event after a dry season represents a period of high activity in soils, during which a large portion of annual carbon turnover occurs. Despite the importance of this phenomenon, we lack ...

ARC Centre of Excellence in Synthetic Biology, Brisbane, Queensland 4001, Australia Centre for Agriculture and the Bioeconomy, Queensland University of Technology, Brisbane, Queensland 4001, Australia ...

1 Behavioral Neuroscience Program, Palm Beach Atlantic University, West Palm Beach, FL, USA. 2 Hebrew University of Jerusalem, Jerusalem, Israel. 3 Department of Psychology, Palm Beach Atlantic ...

Codon usage bias, the preference for certain synonymous codons, is a feature of all genomes and plays an important role in determining gene expression levels. Surprisingly, in addition to its role in ...

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